Jobsub ID 205909.0@justin-prod-sched02.dune.hep.ac.uk
| Jobsub ID | 205909.0@justin-prod-sched02.dune.hep.ac.uk |
| Workflow Testing | Yes |
| Workflow ID | 500 |
| Stage ID | 1 |
| User name | amcnab@fnal.gov |
| HTCondor Group | group_dune |
| Requested | Processors | 1 |
| GPU | No |
| RSS bytes | 1073741824 (1024 MiB) |
| Wall seconds limit | 3600 (1 hours) |
| Submitted time | 2025-05-18 06:09:38 |
| Site | CERN |
| Entry | CMSHTPC_T2_CH_CERN_ce506 |
| Last heartbeat | 2025-05-18 06:18:28 |
| From worker node | Hostname | b9p02p9293.cern.ch |
| cpuinfo | AMD EPYC 7543 32-Core Processor |
| OS release | Scientific Linux release 7.9 (Nitrogen) |
| Processors | 1 |
| RSS bytes | 1073741824 (1024 MiB) |
| Wall seconds limit | 343800 (95 hours) |
| GPU | |
| Inner Apptainer? | True |
| Job state | finished |
| Allocator name | justin-allocator-int.dune.hep.ac.uk |
| Started | 2025-05-18 06:11:11 |
| Input files | |
| Jobscript | Exit code | 0 |
| Real time | 6m (416s) |
| CPU time | 0m (34s = 8%) |
| Max RSS bytes | 60260352 (57 MiB) |
| Outputting started | 2025-05-18 06:18:07 |
| Output files | |
| Finished | 2025-05-18 06:18:28 |
| Saved logs | justin-logs:205909.0-justin-prod-sched02.dune.hep.ac.uk.logs.tgz |
| List job events Wrapper job log |
Jobscript log (last 10,000 characters)
EBUG:dogpile.lock:Released creation lock
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/?expression=SURFSARA HTTP/1.1" 200 None
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/SURFSARA HTTP/1.1" 200 1258
DEBUG:root:Input validation done.
INFO:root:Preparing upload for file awt-1747548678-rzwHPPQl1U
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/SURFSARA/attr/ HTTP/1.1" 200 308
DEBUG:root:wan domain is used for the upload
DEBUG:root:Registering file
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /accounts/dunepro/scopes/ HTTP/1.1" 200 779
DEBUG:root:Trying to create dataset: testpro:awt-uploads-202519
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /dids/testpro/awt-uploads-202519 HTTP/1.1" 409 104
INFO:root:Dataset testpro:awt-uploads-202519 already exists - no rule will be created
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /dids/testpro/awt-1747548678-rzwHPPQl1U/meta?plugin=DID_COLUMN HTTP/1.1" 404 129
DEBUG:root:File DID does not exist
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /replicas HTTP/1.1" 201 7
INFO:root:Successfully added replica in Rucio catalogue at SURFSARA
DEBUG:root:gfal.Default: connecting to storage
DEBUG:root:Checking if root://otter12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/4a/97/awt-1747548678-rzwHPPQl1U exists
DEBUG:root:gfal.Default: checking if file exists root://otter12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/4a/97/awt-1747548678-rzwHPPQl1U
DEBUG:root:gfal.Default: closing protocol connection
DEBUG:root:[{'hostname': 'otter12.grid.surfsara.nl', 'scheme': 'root', 'port': 21094, 'prefix': '/pnfs/grid.sara.nl/data/dune/disk/RSE', 'impl': 'rucio.rse.protocols.gfal.Default', 'domains': {'lan': {'read': 1, 'write': 2, 'delete': 2}, 'wan': {'read': 1, 'write': 2, 'delete': 2, 'third_party_copy_read': 10, 'third_party_copy_write': 10}}, 'extended_attributes': None}, {'hostname': 'webdav.grid.surfsara.nl', 'scheme': 'davs', 'port': 2880, 'prefix': '/pnfs/grid.sara.nl/data/dune/disk/RSE', 'impl': 'rucio.rse.protocols.gfal.Default', 'domains': {'lan': {'read': 2, 'write': 1, 'delete': 1}, 'wan': {'read': 2, 'write': 1, 'delete': 1, 'third_party_copy_read': 1, 'third_party_copy_write': 1}}, 'extended_attributes': None}]
INFO:root:Trying upload with davs to SURFSARA
DEBUG:root:Processing upload with the domain: wan
DEBUG:root:gfal.Default: connecting to storage
DEBUG:root:The PFN created from the LFN: davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/4a/97/awt-1747548678-rzwHPPQl1U
DEBUG:root:gfal.Default: checking if file exists davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/4a/97/awt-1747548678-rzwHPPQl1U
DEBUG:root:gfal.Default: checking if file exists davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/4a/97/awt-1747548678-rzwHPPQl1U.rucio.upload
DEBUG:root:put: Attempt 1
DEBUG:root:gfal.Default: uploading file from awt-1747548678-rzwHPPQl1U to davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/4a/97/awt-1747548678-rzwHPPQl1U.rucio.upload
INFO:root:Successful upload of temporary file. davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/4a/97/awt-1747548678-rzwHPPQl1U.rucio.upload
DEBUG:root:skip_upload_stat=False
DEBUG:root:stat: pfn=davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/4a/97/awt-1747548678-rzwHPPQl1U.rucio.upload
DEBUG:root:gfal.Default: getting stats of file davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/4a/97/awt-1747548678-rzwHPPQl1U.rucio.upload
DEBUG:root:Filesize: Expected=26 Found=26
DEBUG:root:Checksum: Expected=63df0758 Found=63df0758
DEBUG:root:Renaming file davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/4a/97/awt-1747548678-rzwHPPQl1U.rucio.upload to davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/4a/97/awt-1747548678-rzwHPPQl1U
DEBUG:root:gfal.Default: renaming file from davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/4a/97/awt-1747548678-rzwHPPQl1U.rucio.upload to davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/4a/97/awt-1747548678-rzwHPPQl1U
DEBUG:root:gfal.Default: closing protocol connection
DEBUG:root:Upload done.
INFO:root:Successfully uploaded file awt-1747548678-rzwHPPQl1U
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
/cvmfs/dune.opensciencegrid.org/products/dune/rucio/v37_1_0_post1/NULL/lib/python3.9/site-packages/urllib3/connectionpool.py:1061: InsecureRequestWarning: Unverified HTTPS request is being made to host 'dune-rucio.fnal.gov'. Adding certificate verification is strongly advised. See: https://urllib3.readthedocs.io/en/1.26.x/advanced-usage.html#ssl-warnings
warnings.warn(
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /traces/ HTTP/1.1" 404 207
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "PUT /replicas HTTP/1.1" 200 0
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /dids/testpro/awt-uploads-202519/dids HTTP/1.1" 201 7
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /replicas/list HTTP/1.1" 200 None
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /dids/testpro/awt-uploads-202519/files HTTP/1.1" 200 None
--- Upload try 1/1
--- Rucio upload 1/1 returns 0
--- Replica check try 1/1
--- Dataset awt-uploads-202519 check try 1/1
--- Upload, replicas, and datasets checks passed
'justin-rucio-upload --rse SURFSARA --protocol davs --scope testpro --dataset awt-uploads-202519 awt-1747548678-rzwHPPQl1U --timeout 1200' returns 0
subject : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=3392666714/CN=174754867140
issuer : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=3392666714
identity : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=3392666714
type : RFC compliant proxy
strength : 2048 bits
path : /home/awt-proxy.pem
timeleft : 167:53:04
key usage : Digital Signature, Key Encipherment, Key Agreement
=== VO dune extension information ===
VO : dune
subject : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk
issuer : /DC=org/DC=incommon/C=US/ST=Illinois/O=Fermi Research Alliance/CN=voms2.fnal.gov
attribute : /dune/Role=Production/Capability=NULL
attribute : /dune/Role=NULL/Capability=NULL
timeleft : 165:21:56
uri : voms2.fnal.gov:15042
===== Results =====
Download/upload commands:
xrdcp --force --nopbar --verbose $read_pfn downloaded.txt
echo '{"namespace":"testpro","name":"FILENAME","size":0}' >tmp.json
metacat file declare --json -f tmp.json "dune:all"
justin-rucio-upload --rse $rse_name --protocol $write_protocol --scope testpro --dataset awt-uploads-202519 --timeout 1200 FILENAME
Use the wrapper job link on the page for the job on the justIN Dashboard to find the full log file, with errors from these commands
Each line: $JUSTIN_SITE_NAME $rse_name $download_retval $upload_retval $read_pfn $write_protocol
==awt== CERN DUNE_CA_SFU 0 0 root://lcg-dunese1.sfu.computecanada.ca:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CERN DUNE_CERN_EOS 0 0 root://eospublic.cern.ch:1094//eos/experiment/neutplatform/protodune/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CERN DUNE_ES_PIC 0 0 root://xrootd.pic.es:1094/pnfs/pic.es/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CERN DUNE_FR_CCIN2P3_DISK 0 0 root://ccxrootdegee.in2p3.fr:1094/pnfs/in2p3.fr/data/dune/disk/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CERN DUNE_IT_INFN_CNAF 51 99 root://xrootd-archive.cr.cnaf.infn.it:1096//dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CERN DUNE_UK_GLASGOW 52 99 root://cephc02.gla.scotgrid.ac.uk:1094//cephfs/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CERN DUNE_UK_LANCASTER_CEPH 0 0 root://xgate.hec.lancs.ac.uk:1094//cephfs/grid/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CERN DUNE_UK_MANCHESTER_CEPH 0 0 root://meitner.tier2.hep.manchester.ac.uk:1094//cephfs/experiments/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CERN DUNE_US_BNL_SDCC 0 0 root://dcdndoor.sdcc.bnl.gov:1094//pnfs/sdcc.bnl.gov/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CERN DUNE_US_FNAL_DISK_STAGE 0 0 root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CERN NIKHEF 53 0 root://dune.dcache.nikhef.nl:1094/pnfs/nikhef.nl/data/dune/generic/rucio/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CERN PRAGUE 0 0 root://golias100.farm.particle.cz:1094/dpm/farm.particle.cz/home/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CERN QMUL 51 99 root://xrootd1.esc.qmul.ac.uk:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CERN RAL-PP 0 0 root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CERN RAL_ECHO 0 0 root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CERN SURFSARA 0 0 root://otter12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs 