INT           Dashboard       Workflows       Jobs       AWT       Sites       Storages       Docs       Login

Jobsub ID 290932.0@justin-prod-sched01.dune.hep.ac.uk

Jobsub ID290932.0@justin-prod-sched01.dune.hep.ac.uk
Workflow TestingYes
Workflow ID500
Stage ID1
User nameamcnab@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
GPUNo
RSS bytes1073741824 (1024 MiB)
Wall seconds limit3600 (1 hours)
Submitted time2024-11-15 23:11:05
SiteUS_BNL
EntryDUNE_US_BNL_sp02
Last heartbeat2024-11-15 23:54:03
From worker nodeHostnamespool1570.sdcc.bnl.gov
cpuinfoIntel(R) Xeon(R) Gold 6336Y CPU @ 2.40GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes1073741824 (1024 MiB)
Wall seconds limit171000 (47 hours)
GPU
Inner Apptainer?False
Job stateoutputting_failed
Allocator namejustin-allocator-int.dune.hep.ac.uk
Started2024-11-15 23:51:13
Input files
JobscriptExit code0
Real time0m (0s)
CPU time0m (0s = 0%)
Outputting started2024-11-15 23:53:45
Output files
Finished2024-11-15 23:54:03
List job events     Wrapper job log

Jobscript log (last 10,000 characters)

FSARA HTTP/1.1" 200 1260
DEBUG:root:Input validation done.
INFO:root:Preparing upload for file awt-1731714681-hqhLOqsjaq
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/SURFSARA/attr/ HTTP/1.1" 200 308
DEBUG:root:wan domain is used for the upload
DEBUG:root:Registering file
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /accounts/dunepro/scopes/ HTTP/1.1" 200 737
DEBUG:root:Trying to create dataset: testpro:awt-uploads-202446
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /dids/testpro/awt-uploads-202446 HTTP/1.1" 409 104
DEBUG:charset_normalizer:Encoding detection: ascii is most likely the one.
DEBUG:charset_normalizer:Encoding detection: ascii is most likely the one.
DEBUG:charset_normalizer:Encoding detection: ascii is most likely the one.
INFO:root:Dataset testpro:awt-uploads-202446 already exists - no rule will be created
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /dids/testpro/awt-1731714681-hqhLOqsjaq/meta?plugin=DID_COLUMN HTTP/1.1" 404 129
DEBUG:charset_normalizer:Encoding detection: ascii is most likely the one.
DEBUG:charset_normalizer:Encoding detection: ascii is most likely the one.
DEBUG:charset_normalizer:Encoding detection: ascii is most likely the one.
DEBUG:root:File DID does not exist
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /replicas HTTP/1.1" 201 7
INFO:root:Successfully added replica in Rucio catalogue at SURFSARA
DEBUG:rucio.rse.protocols.protocol:PFN2LFN function will not be fetched from the policy package
DEBUG:root:gfal.Default: connecting to storage
DEBUG:root:gfal.Default: checking if file exists None
DEBUG:root:Checking if root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/ab/af/awt-1731714681-hqhLOqsjaq exists
DEBUG:root:gfal.Default: checking if file exists root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/ab/af/awt-1731714681-hqhLOqsjaq
DEBUG:root:gfal.Default: closing protocol connection
DEBUG:root:[{'hostname': 'webdav.grid.surfsara.nl', 'scheme': 'davs', 'port': 2880, 'prefix': '/pnfs/grid.sara.nl/data/dune/disk/RSE', 'impl': 'rucio.rse.protocols.gfal.Default', 'domains': {'lan': {'read': 2, 'write': 1, 'delete': 1}, 'wan': {'read': 2, 'write': 1, 'delete': 1, 'third_party_copy_read': 1, 'third_party_copy_write': 1}}, 'extended_attributes': None}, {'hostname': 'penguin12.grid.surfsara.nl', 'scheme': 'root', 'port': 21094, 'prefix': '/pnfs/grid.sara.nl/data/dune/disk/RSE', 'impl': 'rucio.rse.protocols.gfal.Default', 'domains': {'lan': {'read': 1, 'write': 1, 'delete': 2}, 'wan': {'read': 1, 'write': 1, 'delete': 2, 'third_party_copy_read': 10, 'third_party_copy_write': 10}}, 'extended_attributes': None}]
INFO:root:Trying upload with root to SURFSARA
DEBUG:root:Processing upload with the domain: wan
DEBUG:root:gfal.Default: connecting to storage
DEBUG:root:The PFN created from the LFN: root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/ab/af/awt-1731714681-hqhLOqsjaq
DEBUG:root:gfal.Default: checking if file exists root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/ab/af/awt-1731714681-hqhLOqsjaq
DEBUG:root:gfal.Default: checking if file exists root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/ab/af/awt-1731714681-hqhLOqsjaq.rucio.upload
DEBUG:root:put: Attempt 1
DEBUG:root:gfal.Default: uploading file from awt-1731714681-hqhLOqsjaq to root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/ab/af/awt-1731714681-hqhLOqsjaq.rucio.upload
INFO:root:Successful upload of temporary file. root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/ab/af/awt-1731714681-hqhLOqsjaq.rucio.upload
DEBUG:root:skip_upload_stat=False
DEBUG:root:stat: pfn=root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/ab/af/awt-1731714681-hqhLOqsjaq.rucio.upload
DEBUG:root:gfal.Default: getting stats of file root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/ab/af/awt-1731714681-hqhLOqsjaq.rucio.upload
DEBUG:root:Filesize: Expected=26 Found=26
DEBUG:root:Checksum: Expected=63b707b4 Found=63b707b4
DEBUG:root:Renaming file root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/ab/af/awt-1731714681-hqhLOqsjaq.rucio.upload to root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/ab/af/awt-1731714681-hqhLOqsjaq
DEBUG:root:gfal.Default: renaming file from root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/ab/af/awt-1731714681-hqhLOqsjaq.rucio.upload to root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/ab/af/awt-1731714681-hqhLOqsjaq
DEBUG:root:gfal.Default: closing protocol connection
DEBUG:root:Upload done.
INFO:root:Successfully uploaded file awt-1731714681-hqhLOqsjaq
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
/cvmfs/dune.opensciencegrid.org/products/dune/rucio/v35_4_0/NULL/lib/python3.9/site-packages/urllib3/connectionpool.py:1061: InsecureRequestWarning: Unverified HTTPS request is being made to host 'dune-rucio.fnal.gov'. Adding certificate verification is strongly advised. See: https://urllib3.readthedocs.io/en/1.26.x/advanced-usage.html#ssl-warnings
  warnings.warn(
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /traces/ HTTP/1.1" 404 207
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "PUT /replicas HTTP/1.1" 200 0
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /dids/testpro/awt-uploads-202446/dids HTTP/1.1" 201 7
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /replicas/list HTTP/1.1" 200 None
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /dids/testpro/awt-uploads-202446/files HTTP/1.1" 200 None
--- Upload try 1/1
--- Rucio upload 1/1 returns 0
--- Replica check try 1/1
--- Dataset awt-uploads-202446 check try 1/1
--- Upload, replicas, and datasets checks passed
'justin-rucio-upload --rse SURFSARA --protocol davs --scope testpro --dataset awt-uploads-202446 awt-1731714681-hqhLOqsjaq --timeout 1200' returns 0


subject   : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=1141685340/CN=173171467397
issuer    : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=1141685340
identity  : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=1141685340
type      : RFC compliant proxy
strength  : 2048 bits
path      : /srv/home/awt-proxy.pem
timeleft  : 167:57:29
key usage : Digital Signature, Key Encipherment, Key Agreement
=== VO dune extension information ===
VO        : dune
subject   : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk
issuer    : /DC=org/DC=incommon/C=US/ST=Illinois/O=Fermi Research Alliance/CN=voms1.fnal.gov
attribute : /dune/Role=Production/Capability=NULL
attribute : /dune/Role=NULL/Capability=NULL
timeleft  : 147:12:20
uri       : voms1.fnal.gov:15042

===== Results =====

Download/upload commands:
xrdcp --force --nopbar --verbose $read_pfn downloaded.txt
echo '{"namespace":"testpro","name":"FILENAME","size":0}' >tmp.json
metacat file declare --json -f tmp.json "dune:all"
justin-rucio-upload --rse $rse_name --protocol $write_protocol --scope testpro --dataset awt-uploads-202446 --timeout 1200 FILENAME
Use the wrapper job link on the page for the job on the justIN Dashboard to find the full log file, with errors from these commands

Each line: $JUSTIN_SITE_NAME $rse_name $download_retval $upload_retval $read_pfn $write_protocol
==awt== US_BNL DUNE_CERN_EOS 0 0 root://eospublic.cern.ch:1094//eos/experiment/neutplatform/protodune/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_BNL DUNE_ES_PIC 0 0 root://xrootd.pic.es:1094/pnfs/pic.es/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_BNL DUNE_FR_CCIN2P3_DISK 0 0 root://ccxrootdegee.in2p3.fr:1094/pnfs/in2p3.fr/data/dune/disk/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_BNL DUNE_UK_GLASGOW 0 0 root://cephc02.gla.scotgrid.ac.uk:1094//cephfs/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_BNL DUNE_UK_LANCASTER_CEPH 0 0 root://xgate.hec.lancs.ac.uk:1094//cephfs/grid/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_BNL DUNE_UK_MANCHESTER_CEPH 0 0 root://meitner.tier2.hep.manchester.ac.uk:1094//cephfs/experiments/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_BNL DUNE_US_BNL_SDCC 0 0 root://dcdndoor.sdcc.bnl.gov:1094//pnfs/sdcc.bnl.gov/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_BNL DUNE_US_FNAL_DISK_STAGE 0 0 root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_BNL NIKHEF 0 0 root://dune.dcache.nikhef.nl:1094/pnfs/nikhef.nl/data/dune/generic/rucio/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_BNL PRAGUE 0 0 root://golias100.farm.particle.cz:1094/dpm/farm.particle.cz/home/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_BNL QMUL 51 0 root://xrootd01.escqmul.ac.uk:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_BNL RAL-PP 0 0 root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_BNL RAL_ECHO 0 0 root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_BNL SURFSARA 0 0 root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
justIN time: 2024-11-21 17:04:51 UTC       justIN version: 01.02.rc5