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Jobsub ID 401141.0@justin-prod-sched01.dune.hep.ac.uk

Jobsub ID401141.0@justin-prod-sched01.dune.hep.ac.uk
Workflow TestingYes
Workflow ID500
Stage ID1
User nameamcnab@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
GPUNo
RSS bytes1073741824 (1024 MiB)
Wall seconds limit3600 (1 hours)
Submitted time2025-05-20 18:18:22
SiteCA_SFU
EntryDUNE_CA_SFU_lcg-ce3
Last heartbeat2025-05-20 20:34:36
From worker nodeHostnamecdr927.int.cedar.computecanada.ca
cpuinfoIntel(R) Xeon(R) CPU E5-2683 v4 @ 2.10GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes1073741824 (1024 MiB)
Wall seconds limit84598 (23 hours)
GPU
Inner Apptainer?True
Job statefinished
Allocator namejustin-allocator-int.dune.hep.ac.uk
Started2025-05-20 20:31:11
Input files
JobscriptExit code0
Real time3m (185s)
CPU time0m (32s = 17%)
Max RSS bytes64978944 (61 MiB)
Outputting started2025-05-20 20:34:17
Output files
Finished2025-05-20 20:34:36
Saved logsjustin-logs:401141.0-justin-prod-sched01.dune.hep.ac.uk.logs.tgz
List job events     Wrapper job log

Jobscript log (last 10,000 characters)

rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/?expression=SURFSARA HTTP/1.1" 200 None
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/SURFSARA HTTP/1.1" 200 1258
DEBUG:root:Input validation done.
INFO:root:Preparing upload for file awt-1747773076-BZEPCpDpz3
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/SURFSARA/attr/ HTTP/1.1" 200 308
DEBUG:root:wan domain is used for the upload
DEBUG:root:Registering file
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /accounts/dunepro/scopes/ HTTP/1.1" 200 779
DEBUG:root:Trying to create dataset: testpro:awt-uploads-202520
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /dids/testpro/awt-uploads-202520 HTTP/1.1" 409 104
INFO:root:Dataset testpro:awt-uploads-202520 already exists - no rule will be created
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /dids/testpro/awt-1747773076-BZEPCpDpz3/meta?plugin=DID_COLUMN HTTP/1.1" 404 129
DEBUG:root:File DID does not exist
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /replicas HTTP/1.1" 201 7
INFO:root:Successfully added replica in Rucio catalogue at SURFSARA
DEBUG:root:gfal.Default: connecting to storage
DEBUG:root:Checking if root://otter12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/1e/82/awt-1747773076-BZEPCpDpz3 exists
DEBUG:root:gfal.Default: checking if file exists root://otter12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/1e/82/awt-1747773076-BZEPCpDpz3
DEBUG:root:gfal.Default: closing protocol connection
DEBUG:root:[{'hostname': 'otter12.grid.surfsara.nl', 'scheme': 'root', 'port': 21094, 'prefix': '/pnfs/grid.sara.nl/data/dune/disk/RSE', 'impl': 'rucio.rse.protocols.gfal.Default', 'domains': {'lan': {'read': 1, 'write': 2, 'delete': 2}, 'wan': {'read': 1, 'write': 2, 'delete': 2, 'third_party_copy_read': 10, 'third_party_copy_write': 10}}, 'extended_attributes': None}, {'hostname': 'webdav.grid.surfsara.nl', 'scheme': 'davs', 'port': 2880, 'prefix': '/pnfs/grid.sara.nl/data/dune/disk/RSE', 'impl': 'rucio.rse.protocols.gfal.Default', 'domains': {'lan': {'read': 2, 'write': 1, 'delete': 1}, 'wan': {'read': 2, 'write': 1, 'delete': 1, 'third_party_copy_read': 1, 'third_party_copy_write': 1}}, 'extended_attributes': None}]
INFO:root:Trying upload with davs to SURFSARA
DEBUG:root:Processing upload with the domain: wan
DEBUG:root:gfal.Default: connecting to storage
DEBUG:root:The PFN created from the LFN: davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/1e/82/awt-1747773076-BZEPCpDpz3
DEBUG:root:gfal.Default: checking if file exists davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/1e/82/awt-1747773076-BZEPCpDpz3
DEBUG:root:gfal.Default: checking if file exists davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/1e/82/awt-1747773076-BZEPCpDpz3.rucio.upload
DEBUG:root:put: Attempt 1
DEBUG:root:gfal.Default: uploading file from awt-1747773076-BZEPCpDpz3 to davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/1e/82/awt-1747773076-BZEPCpDpz3.rucio.upload
INFO:root:Successful upload of temporary file. davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/1e/82/awt-1747773076-BZEPCpDpz3.rucio.upload
DEBUG:root:skip_upload_stat=False
DEBUG:root:stat: pfn=davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/1e/82/awt-1747773076-BZEPCpDpz3.rucio.upload
DEBUG:root:gfal.Default: getting stats of file davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/1e/82/awt-1747773076-BZEPCpDpz3.rucio.upload
DEBUG:root:Filesize: Expected=26 Found=26
DEBUG:root:Checksum: Expected=5f6b0707 Found=5f6b0707
DEBUG:root:Renaming file davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/1e/82/awt-1747773076-BZEPCpDpz3.rucio.upload to davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/1e/82/awt-1747773076-BZEPCpDpz3
DEBUG:root:gfal.Default: renaming file from davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/1e/82/awt-1747773076-BZEPCpDpz3.rucio.upload to davs://webdav.grid.surfsara.nl:2880/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/1e/82/awt-1747773076-BZEPCpDpz3
DEBUG:root:gfal.Default: closing protocol connection
DEBUG:root:Upload done.
INFO:root:Successfully uploaded file awt-1747773076-BZEPCpDpz3
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
/cvmfs/dune.opensciencegrid.org/products/dune/rucio/v37_1_0_post1/NULL/lib/python3.9/site-packages/urllib3/connectionpool.py:1061: InsecureRequestWarning: Unverified HTTPS request is being made to host 'dune-rucio.fnal.gov'. Adding certificate verification is strongly advised. See: https://urllib3.readthedocs.io/en/1.26.x/advanced-usage.html#ssl-warnings
  warnings.warn(
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /traces/ HTTP/1.1" 404 207
DEBUG:urllib3.connectionpool:Resetting dropped connection: dune-rucio.fnal.gov
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "PUT /replicas HTTP/1.1" 200 0
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /dids/testpro/awt-uploads-202520/dids HTTP/1.1" 201 7
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /replicas/list HTTP/1.1" 200 None
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /dids/testpro/awt-uploads-202520/files HTTP/1.1" 200 None
--- Upload try 1/1
--- Rucio upload 1/1 returns 0
--- Replica check try 1/1
--- Dataset awt-uploads-202520 check try 1/1
--- Upload, replicas, and datasets checks passed
'justin-rucio-upload --rse SURFSARA --protocol davs --scope testpro --dataset awt-uploads-202520 awt-1747773076-BZEPCpDpz3 --timeout 1200' returns 0


subject   : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=2988894044/CN=174777307175
issuer    : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=2988894044
identity  : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=2988894044
type      : RFC compliant proxy
strength  : 2048 bits
path      : /home/awt-proxy.pem
timeleft  : 167:56:54
key usage : Digital Signature, Key Encipherment, Key Agreement
=== VO dune extension information ===
VO        : dune
subject   : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk
issuer    : /DC=org/DC=incommon/C=US/ST=Illinois/O=Fermi Research Alliance/CN=voms2.fnal.gov
attribute : /dune/Role=Production/Capability=NULL
attribute : /dune/Role=NULL/Capability=NULL
timeleft  : 151:01:45
uri       : voms2.fnal.gov:15042

===== Results =====

Download/upload commands:
xrdcp --force --nopbar --verbose $read_pfn downloaded.txt
echo '{"namespace":"testpro","name":"FILENAME","size":0}' >tmp.json
metacat file declare --json -f tmp.json "dune:all"
justin-rucio-upload --rse $rse_name --protocol $write_protocol --scope testpro --dataset awt-uploads-202520 --timeout 1200 FILENAME
Use the wrapper job link on the page for the job on the justIN Dashboard to find the full log file, with errors from these commands

Each line: $JUSTIN_SITE_NAME $rse_name $download_retval $upload_retval $read_pfn $write_protocol
==awt== CA_SFU DUNE_CA_SFU 0 0 root://lcg-dunese1.sfu.computecanada.ca:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CA_SFU DUNE_CERN_EOS 0 0 root://eospublic.cern.ch:1094//eos/experiment/neutplatform/protodune/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CA_SFU DUNE_ES_PIC 0 0 root://xrootd.pic.es:1094/pnfs/pic.es/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CA_SFU DUNE_FR_CCIN2P3_DISK 0 0 root://ccxrootdegee.in2p3.fr:1094/pnfs/in2p3.fr/data/dune/disk/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CA_SFU DUNE_IT_INFN_CNAF 51 99 root://xrootd-archive.cr.cnaf.infn.it:1096//dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CA_SFU DUNE_UK_GLASGOW 52 99 root://cephc02.gla.scotgrid.ac.uk:1094//cephfs/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CA_SFU DUNE_UK_LANCASTER_CEPH 0 0 root://xgate.hec.lancs.ac.uk:1094//cephfs/grid/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CA_SFU DUNE_UK_MANCHESTER_CEPH 0 0 root://meitner.tier2.hep.manchester.ac.uk:1094//cephfs/experiments/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CA_SFU DUNE_US_BNL_SDCC 0 0 root://dcdndoor.sdcc.bnl.gov:1094//pnfs/sdcc.bnl.gov/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CA_SFU DUNE_US_FNAL_DISK_STAGE 0 0 root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CA_SFU NIKHEF 0 0 root://dune.dcache.nikhef.nl:1094/pnfs/nikhef.nl/data/dune/generic/rucio/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CA_SFU PRAGUE 0 0 root://golias100.farm.particle.cz:1094/dpm/farm.particle.cz/home/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CA_SFU QMUL 52 99 root://xrootd1.esc.qmul.ac.uk:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CA_SFU RAL-PP 0 0 root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CA_SFU RAL_ECHO 0 0 root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== CA_SFU SURFSARA 0 0 root://otter12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
justIN time: 2025-05-22 02:04:56 UTC       justIN version: 01.04.rc1