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Jobsub ID 466804.0@justin-prod-sched01.dune.hep.ac.uk

Jobsub ID466804.0@justin-prod-sched01.dune.hep.ac.uk
Workflow TestingYes
Workflow ID1
Stage ID1
User nameamcnab@fnal.gov
RequestedProcessors1
GPUNo
RSS bytes1073741824 (1024 MiB)
Wall seconds limit3600 (1 hours)
Submitted time2025-12-10 11:57:34
SiteUK_QMUL
EntryDUNE_UK_London_QMUL_arcce02
Last heartbeat2025-12-10 12:58:59
From worker nodeHostnamecn027.htc.esc.qmul
cpuinfoIntel(R) Xeon(R) Gold 6248R CPU @ 3.00GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes1073741824 (1024 MiB)
Wall seconds limit171000 (47 hours)
GPU
Inner Apptainer?True
Job stateoutputting_failed
Started2025-12-10 11:58:57
Input files
JobscriptExit code0
Real time53m (3197s)
CPU time0m (32s = 1%)
Max RSS bytes65765376 (62 MiB)
Outputting started2025-12-10 12:52:14
Output files
Finished2025-12-10 12:58:59
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

nnection timed out'))

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_1_2/NULL/bin/metacat", line 8, in <module>
    sys.exit(main())
  File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_1_2/NULL/lib/python3.9/site-packages/metacat/ui/metacat_ui.py", line 202, in main
    cli.run(sys.argv, argv0="metacat")
  File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_1_2/NULL/lib/python3.9/site-packages/metacat/ui/cli/cli.py", line 216, in run
    self._run(command, context, argv, usage_on_error)
  File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_1_2/NULL/lib/python3.9/site-packages/metacat/ui/cli/cli.py", line 211, in _run
    return interp._run(pre_command + word, context, rest, usage_on_error = usage_on_error)
  File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_1_2/NULL/lib/python3.9/site-packages/metacat/ui/cli/cli.py", line 211, in _run
    return interp._run(pre_command + word, context, rest, usage_on_error = usage_on_error)
  File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_1_2/NULL/lib/python3.9/site-packages/metacat/ui/cli/cli.py", line 112, in _run
    return self(command, context, opts, args)
  File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_1_2/NULL/lib/python3.9/site-packages/metacat/ui/metacat_file.py", line 200, in __call__
    response = list(client.declare_files(f"{dataset_namespace}:{dataset_name}", 
  File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_1_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 825, in declare_files
    out = self.post_json(url, lst)
  File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_1_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 215, in post_json
    response = self.send_request("post", uri_suffix, data=data, headers=headers, stream=True)
  File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_1_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 154, in send_request
    self.LastResponse = response = self.retry_request(method, url, headers=headers, **args)
  File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_1_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 133, in retry_request
    response = requests.post(url, timeout=self.Timeout, **args)
  File "/cvmfs/dune.opensciencegrid.org/products/dune/python_requests/v2_25_0/NULL/lib/python3/site-packages/requests/api.py", line 119, in post
    return request('post', url, data=data, json=json, **kwargs)
  File "/cvmfs/dune.opensciencegrid.org/products/dune/python_requests/v2_25_0/NULL/lib/python3/site-packages/requests/api.py", line 61, in request
    return session.request(method=method, url=url, **kwargs)
  File "/cvmfs/dune.opensciencegrid.org/products/dune/python_requests/v2_25_0/NULL/lib/python3/site-packages/requests/sessions.py", line 542, in request
    resp = self.send(prep, **send_kwargs)
  File "/cvmfs/dune.opensciencegrid.org/products/dune/python_requests/v2_25_0/NULL/lib/python3/site-packages/requests/sessions.py", line 655, in send
    r = adapter.send(request, **kwargs)
  File "/cvmfs/dune.opensciencegrid.org/products/dune/python_requests/v2_25_0/NULL/lib/python3/site-packages/requests/adapters.py", line 516, in send
    raise ConnectionError(e, request=request)
requests.exceptions.ConnectionError: HTTPSConnectionPool(host='metacat.fnal.gov', port=9443): Max retries exceeded with url: /dune_meta_prod/app/data/declare_files?dataset=dune:all (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x14735a900af0>: Failed to establish a new connection: [Errno 110] Connection timed out'))
metacat file declare returns 1
GFAL_CONFIG_DIR:    GFAL_PLUGIN_DIR: 
justin-rucio-upload attempt 1
DEBUG:root:Num. of files that upload client is processing: 1
DEBUG:dogpile.cache.region:No value present for key: "host_to_choose_choice['https://dune-rucio.fnal.gov']"
DEBUG:dogpile.lock:NeedRegenerationException
DEBUG:dogpile.lock:no value, waiting for create lock
DEBUG:dogpile.lock:value creation lock <dogpile.cache.region.CacheRegion._LockWrapper object at 0x14a0d6f48a30> acquired
DEBUG:dogpile.cache.region:No value present for key: "host_to_choose_choice['https://dune-rucio.fnal.gov']"
DEBUG:dogpile.lock:Calling creation function for not-yet-present value
DEBUG:dogpile.cache.region:Cache value generated in 0.000 seconds for key(s): "host_to_choose_choice['https://dune-rucio.fnal.gov']"
DEBUG:dogpile.lock:Released creation lock
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/?expression=T3_US_NERSC HTTP/1.1" 200 None
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/T3_US_NERSC HTTP/1.1" 200 1240
DEBUG:root:Input validation done.
INFO:root:Preparing upload for file awt-1765367941-BuQVsQQ40w
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/T3_US_NERSC/attr/ HTTP/1.1" 200 139
DEBUG:root:wan domain is used for the upload
DEBUG:root:Registering file
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /accounts/dunepro/scopes/ HTTP/1.1" 200 870
DEBUG:root:Trying to create dataset: testpro:awt-uploads-202549
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /dids/testpro/awt-uploads-202549 HTTP/1.1" 500 323
--- Upload try 1/1
--- Rucio upload 1/1 fails: An unknown exception occurred.
Details: no error information passed (http status code: 500)
--- Exit with 99
'justin-rucio-upload --rse T3_US_NERSC --protocol davs --scope testpro --dataset awt-uploads-202549 awt-1765367941-BuQVsQQ40w --timeout 1200' returns 99


subject   : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=378614481/CN=176536793717
issuer    : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=378614481
identity  : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=378614481
type      : RFC compliant proxy
strength  : 2048 bits
path      : /home/awt-proxy.pem
timeleft  : 167:06:43
key usage : Digital Signature, Key Encipherment, Key Agreement
=== VO dune extension information ===
VO        : dune
subject   : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk
issuer    : /DC=org/DC=incommon/C=US/ST=Illinois/O=Fermi Research Alliance/CN=voms2.fnal.gov
attribute : /dune/Role=Production/Capability=NULL
attribute : /dune/Role=NULL/Capability=NULL
timeleft  : 158:28:48
uri       : voms2.fnal.gov:15042

===== Results =====

Download/upload commands:
xrdcp --force --nopbar --verbose $read_pfn downloaded.txt
echo '{"namespace":"testpro","name":"FILENAME","size":0}' >tmp.json
metacat file declare --json -f tmp.json "dune:all"
justin-rucio-upload --rse $rse_name --protocol $write_protocol --scope testpro --dataset awt-uploads-202549 --timeout 1200 FILENAME
Use the wrapper job link on the page for the job on the justIN Dashboard to find the full log file, with errors from these commands

Each line: $JUSTIN_SITE_NAME $rse_name $download_retval $upload_retval $read_pfn $write_protocol
==awt== UK_QMUL DUNE_CA_SFU 0 99 root://lcg-dunese1.sfu.computecanada.ca:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_QMUL DUNE_CERN_EOS 0 99 root://eospublic.cern.ch:1094//eos/experiment/neutplatform/protodune/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_QMUL DUNE_ES_PIC 0 99 root://xrootd.pic.es:1094/pnfs/pic.es/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_QMUL DUNE_FR_CCIN2P3_DISK 0 99 root://ccxrootdegee.in2p3.fr:1094/pnfs/in2p3.fr/data/dune/disk/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_QMUL DUNE_IT_INFN_CNAF 0 99 root://xrootd-archive.cr.cnaf.infn.it:1096//dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_QMUL DUNE_UK_GLASGOW 0 99 root://cephc02.gla.scotgrid.ac.uk:1094//cephfs/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_QMUL DUNE_UK_LANCASTER_CEPH 0 0 root://xgate.hec.lancs.ac.uk:1094//cephfs/grid/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_QMUL DUNE_UK_MANCHESTER_CEPH 0 0 root://meitner.tier2.hep.manchester.ac.uk:1094//cephfs/experiments/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_QMUL DUNE_US_BNL_SDCC 0 0 root://dcdndoor.sdcc.bnl.gov:1094//pnfs/sdcc.bnl.gov/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_QMUL DUNE_US_FNAL_DISK_STAGE 0 0 root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_QMUL FNAL_DCACHE 0 99 root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/tape_backed/dunepro//other/awt-staging/awt-download-2023-03-07-01.txt_1749841165 davs
==awt== UK_QMUL NIKHEF 0 0 root://dune.dcache.nikhef.nl:1094/pnfs/nikhef.nl/data/dune/generic/rucio/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_QMUL PRAGUE 0 0 root://se1.farm.particle.cz:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_QMUL QMUL 0 99 root://xrootd1.esc.qmul.ac.uk:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_QMUL RAL-PP 0 99 root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_QMUL RAL_ECHO 0 99 root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_QMUL SURFSARA 0 99 root://otter12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_QMUL T3_US_NERSC 0 99 root://dtn14.nersc.gov:1094//global/cfs/cdirs/m3249/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
justIN time: 2025-12-19 01:35:36 UTC       justIN version: 01.06.rc4