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Jobsub ID 97318.0@justin-prod-sched02.dune.hep.ac.uk

Jobsub ID97318.0@justin-prod-sched02.dune.hep.ac.uk
Workflow TestingYes
Workflow ID500
Stage ID1
User nameamcnab@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
GPUNo
RSS bytes1073741824 (1024 MiB)
Wall seconds limit3600 (1 hours)
Submitted time2024-11-14 23:08:28
SiteBR_CBPF
EntryDUNE_BR_CBPF_ce04
Last heartbeat2024-11-14 23:13:58
From worker nodeHostnamewn122.cat.cbpf.br
cpuinfoAMD EPYC 7713P 64-Core Processor
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes1073741824 (1024 MiB)
Wall seconds limit257400 (71 hours)
GPU
Inner Apptainer?True
Job stateoutputting_failed
Allocator namejustin-allocator-int.dune.hep.ac.uk
Started2024-11-14 23:09:39
Input files
JobscriptExit code0
Real time3m (206s)
CPU time0m (21s = 10%)
Outputting started2024-11-14 23:13:06
Output files
Finished2024-11-14 23:13:58
List job events     Wrapper job log

Jobscript log (last 10,000 characters)

malizer:Encoding detection: ascii is most likely the one.
DEBUG:charset_normalizer:Encoding detection: ascii is most likely the one.
DEBUG:root:File DID does not exist
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /replicas HTTP/1.1" 201 7
INFO:root:Successfully added replica in Rucio catalogue at RAL_ECHO
DEBUG:rucio.rse.protocols.protocol:PFN2LFN function will not be fetched from the policy package
DEBUG:root:gfal.NoRename: connecting to storage
DEBUG:root:gfal.NoRename: checking if file exists None
DEBUG:root:Checking if root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/5f/53/awt-1731624980-pG5U62D0qU exists
DEBUG:root:gfal.NoRename: checking if file exists root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/5f/53/awt-1731624980-pG5U62D0qU
--- Upload try 1/1
--- Rucio upload 1/1 fails: The requested service is not available at the moment.
Details: An unknown exception occurred.
Details: Failed to stat file (Invalid exchange)
--- Exit with 99
'justin-rucio-upload --rse RAL_ECHO --protocol davs --scope testpro --dataset awt-uploads-202446 awt-1731624980-pG5U62D0qU --timeout 1200' returns 99


---------------------------------------------------------------------
BR_CBPF SURFSARA davs root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt
Run: [FATAL] Auth failed: No protocols left to try (source)
'xrdcp --force --nopbar --verbose root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt downloaded.txt' returns 52
<html><body><h2>Application error</h2>
            <h3>'checksums'</h3>
            <pre>
Traceback (most recent call last):
  File "/home/dbidata/products/webpie/current/webpie/WPApp.py", line 651, in wsgi_call
    response = root_handler._handle_request(request, "", path_down, args)
  File "/home/dbidata/products/webpie/current/webpie/WPApp.py", line 444, in _handle_request
    return subhandler._handle_request(request, path + "/" + word, path_down, args)
  File "/home/dbidata/products/metacat_server/dune/server/common_handler.py", line 144, in _handle_request
    response = super()._handle_request(request, path, path_down, args)
  File "/home/dbidata/products/webpie/current/webpie/WPApp.py", line 442, in _handle_request
    return subhandler(request, relpath, **args)
  File "/home/dbidata/products/metacat_server/dune/server/common_handler.py", line 93, in decorated
    try:    out = method(*params, **agrs)
  File "/home/dbidata/products/metacat_server/dune/server/data_handler.py", line 706, in declare_files
    self.validate_checksums(f,item_errors)
  File "/home/dbidata/products/metacat_server/dune/server/data_handler.py", line 1082, in validate_checksums
    for ct in data["checksums"]:
KeyError: 'checksums'
</pre>
            </body>
            </html>
metacat file declare returns 1
GFAL_CONFIG_DIR:    GFAL_PLUGIN_DIR: 
justin-rucio-upload attempt 1
DEBUG:root:Num. of files that upload client is processing: 1
DEBUG:dogpile.cache.region:No value present for key: "host_to_choose_choice['https://dune-rucio.fnal.gov']"
DEBUG:dogpile.lock:NeedRegenerationException
DEBUG:dogpile.lock:no value, waiting for create lock
DEBUG:dogpile.lock:value creation lock <dogpile.cache.region.CacheRegion._LockWrapper object at 0x2b7b751fb580> acquired
DEBUG:dogpile.cache.region:No value present for key: "host_to_choose_choice['https://dune-rucio.fnal.gov']"
DEBUG:dogpile.lock:Calling creation function for not-yet-present value
DEBUG:dogpile.cache.region:Cache value generated in 0.000 seconds for key(s): "host_to_choose_choice['https://dune-rucio.fnal.gov']"
DEBUG:dogpile.lock:Released creation lock
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/?expression=SURFSARA HTTP/1.1" 200 None
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/SURFSARA HTTP/1.1" 200 1260
DEBUG:root:Input validation done.
INFO:root:Preparing upload for file awt-1731624980-KxM3LJDpd5
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/SURFSARA/attr/ HTTP/1.1" 200 308
DEBUG:root:wan domain is used for the upload
DEBUG:root:Registering file
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /accounts/dunepro/scopes/ HTTP/1.1" 200 737
DEBUG:root:Trying to create dataset: testpro:awt-uploads-202446
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /dids/testpro/awt-uploads-202446 HTTP/1.1" 409 104
DEBUG:charset_normalizer:Encoding detection: ascii is most likely the one.
DEBUG:charset_normalizer:Encoding detection: ascii is most likely the one.
DEBUG:charset_normalizer:Encoding detection: ascii is most likely the one.
INFO:root:Dataset testpro:awt-uploads-202446 already exists - no rule will be created
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /dids/testpro/awt-1731624980-KxM3LJDpd5/meta?plugin=DID_COLUMN HTTP/1.1" 404 129
DEBUG:charset_normalizer:Encoding detection: ascii is most likely the one.
DEBUG:charset_normalizer:Encoding detection: ascii is most likely the one.
DEBUG:charset_normalizer:Encoding detection: ascii is most likely the one.
DEBUG:root:File DID does not exist
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /replicas HTTP/1.1" 201 7
INFO:root:Successfully added replica in Rucio catalogue at SURFSARA
DEBUG:rucio.rse.protocols.protocol:PFN2LFN function will not be fetched from the policy package
DEBUG:root:gfal.Default: connecting to storage
DEBUG:root:gfal.Default: checking if file exists None
DEBUG:root:Checking if root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/ac/3d/awt-1731624980-KxM3LJDpd5 exists
DEBUG:root:gfal.Default: checking if file exists root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/ac/3d/awt-1731624980-KxM3LJDpd5
--- Upload try 1/1
--- Rucio upload 1/1 fails: The requested service is not available at the moment.
Details: An unknown exception occurred.
Details: Failed to stat file (Invalid exchange)
--- Exit with 99
'justin-rucio-upload --rse SURFSARA --protocol davs --scope testpro --dataset awt-uploads-202446 awt-1731624980-KxM3LJDpd5 --timeout 1200' returns 99


subject   : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=1222265042/CN=173162577932
issuer    : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=1222265042
identity  : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=1222265042
type      : RFC compliant proxy
strength  : 2048 bits
path      : /home/awt-proxy.pem
timeleft  : 168:10:15
key usage : Digital Signature, Key Encipherment, Key Agreement
=== VO dune extension information ===
VO        : dune
subject   : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk
issuer    : /DC=org/DC=incommon/C=US/ST=Illinois/O=Fermi Research Alliance/CN=voms1.fnal.gov
attribute : /dune/Role=Production/Capability=NULL
attribute : /dune/Role=NULL/Capability=NULL
timeleft  : 148:41:39
uri       : voms1.fnal.gov:15042

===== Results =====

Download/upload commands:
xrdcp --force --nopbar --verbose $read_pfn downloaded.txt
echo '{"namespace":"testpro","name":"FILENAME","size":0}' >tmp.json
metacat file declare --json -f tmp.json "dune:all"
justin-rucio-upload --rse $rse_name --protocol $write_protocol --scope testpro --dataset awt-uploads-202446 --timeout 1200 FILENAME
Use the wrapper job link on the page for the job on the justIN Dashboard to find the full log file, with errors from these commands

Each line: $JUSTIN_SITE_NAME $rse_name $download_retval $upload_retval $read_pfn $write_protocol
==awt== BR_CBPF DUNE_CERN_EOS 0 0 root://eospublic.cern.ch:1094//eos/experiment/neutplatform/protodune/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF DUNE_ES_PIC 52 99 root://xrootd.pic.es:1094/pnfs/pic.es/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF DUNE_FR_CCIN2P3_DISK 52 99 root://ccxrootdegee.in2p3.fr:1094/pnfs/in2p3.fr/data/dune/disk/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF DUNE_UK_GLASGOW 52 99 root://cephc02.gla.scotgrid.ac.uk:1094//cephfs/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF DUNE_UK_LANCASTER_CEPH 52 99 root://xgate.hec.lancs.ac.uk:1094//cephfs/grid/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF DUNE_UK_MANCHESTER_CEPH 52 99 root://meitner.tier2.hep.manchester.ac.uk:1094//cephfs/experiments/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF DUNE_US_BNL_SDCC 52 99 root://dcdndoor.sdcc.bnl.gov:1094//pnfs/sdcc.bnl.gov/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF DUNE_US_FNAL_DISK_STAGE 52 99 root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF NIKHEF 52 99 root://dune.dcache.nikhef.nl:1094/pnfs/nikhef.nl/data/dune/generic/rucio/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF PRAGUE 54 99 root://golias100.farm.particle.cz:1094/dpm/farm.particle.cz/home/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF QMUL 51 99 root://xrootd01.escqmul.ac.uk:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF RAL-PP 52 99 root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF RAL_ECHO 52 99 root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF SURFSARA 52 99 root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
justIN time: 2024-11-24 10:14:21 UTC       justIN version: 01.02.rc5